Novogene AMEA
  • Novogene AMEA
  • Genomics
    • Human Whole Genome Sequencing
    • Plant and Animal Whole Genome Sequencing
    • Microbial Whole Genome Sequencing
    • Plant and Animal De novo Sequencing
    • Microbial De novo Sequencing
    • Shotgun Metagenomics Sequencing
    • Amplicon Sequencing
    • Whole Exome Sequencing
    Transcriptomics
    • mRNA Sequencing
    • Total RNA Sequencing
    • Full-Length Transcriptome Sequencing
    • Whole Transcriptome Sequencing
    • Small RNA Sequencing
    • Circular RNA Sequencing
    • Metatranscriptome Sequencing
    • Prokaryotic RNA Sequencing
    Single Cell & Spatial Omics
    • Single Cell Gene Expression
    • Single Cell Immune Profiling Sequencing
    • Single Cell Long Read Transcriptome
    • Visium HD Spatial Gene Expression
    • Stereo-Seq Spatial Gene Expression
    • Xenium In Situ Spatial Transcriptome
    Epigenomics
    • Whole Genome Bisulfite Sequencing (WGBS)
    • Directed DNA Methylation Sequencing (DM-Seq) NEW
    • Reduced Representation Bisulfite Sequencing (RRBS)
    • Chromatin Immunoprecipitation Sequencing (ChIP-seq)
    • RNA Immunoprecipitation Sequencing (RIP-seq)
    • Assay for Transposase-Accessible Chromatin with Sequencing (ATAC-seq)

    Premade Library

    • Sequencing Only on Illumina Sequencer
    • Sequencing Only on PacBio Sequencer
    Proteomics and Metabolomics
    • Olink Proteomics
    • Quantitative Proteomics
    • Untargeted Metabolomics
  • PromotionsPromotions
    • Platforms
    • Automated Delivery Platform (Falcon)
    • Bioinformatics Analysis Tool (NovoMagic)
    • Customer Service System (CSS)
    • Brochures
    • Case Studies
    • Webinar
    • Blog
    • Sample Guidelines
    • Cancer Research
    • Immuno-oncology
    • Agrigenomics
    • Environment
    • Food Science
    • Human Microbiome
    • Plant and Animal Microbiome
    • Drug Discovery and Development
    • Rare and Complex Diseases
    • About Us
    • Our Locations
    • News
    • Careers
  • Contact UsContact Us

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Whole Genome SequencingDe novo SequencingAmplicon SequencingShotgun Metagenomic SequencingDirected DNA Methylation Sequencing (DM-Seq)mRNA SequencingSingle Cell Gene ExpressionVisium HD Spatial Gene ExpressionXenium In Situ Spatial TranscriptomeOlink ProteomicsUntargeted Metabolomics
Support
NovoMagic Bioinformatics Analysis ToolCustomer Service SystemFalcon Intelligent Delivery Platform
Company
About UsOur LocationsOur PlatformsNewsCareersContact Us
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Copyright © 2026 Novogene Inc. All rights reserved.For Research Use Only. Not for Clinical Diagnostic Use.
Novogene AMEA
  • Novogene AMEA
  • Genomics
    • Human Whole Genome Sequencing
    • Plant and Animal Whole Genome Sequencing
    • Microbial Whole Genome Sequencing
    • Plant and Animal De novo Sequencing
    • Microbial De novo Sequencing
    • Shotgun Metagenomics Sequencing
    • Amplicon Sequencing
    • Whole Exome Sequencing
    Transcriptomics
    • mRNA Sequencing
    • Total RNA Sequencing
    • Full-Length Transcriptome Sequencing
    • Whole Transcriptome Sequencing
    • Small RNA Sequencing
    • Circular RNA Sequencing
    • Metatranscriptome Sequencing
    • Prokaryotic RNA Sequencing
    Single Cell & Spatial Omics
    • Single Cell Gene Expression
    • Single Cell Immune Profiling Sequencing
    • Single Cell Long Read Transcriptome
    • Visium HD Spatial Gene Expression
    • Stereo-Seq Spatial Gene Expression
    • Xenium In Situ Spatial Transcriptome
    Epigenomics
    • Whole Genome Bisulfite Sequencing (WGBS)
    • Directed DNA Methylation Sequencing (DM-Seq) NEW
    • Reduced Representation Bisulfite Sequencing (RRBS)
    • Chromatin Immunoprecipitation Sequencing (ChIP-seq)
    • RNA Immunoprecipitation Sequencing (RIP-seq)
    • Assay for Transposase-Accessible Chromatin with Sequencing (ATAC-seq)

    Premade Library

    • Sequencing Only on Illumina Sequencer
    • Sequencing Only on PacBio Sequencer
    Proteomics and Metabolomics
    • Olink Proteomics
    • Quantitative Proteomics
    • Untargeted Metabolomics
  • PromotionsPromotions
    • Platforms
    • Automated Delivery Platform (Falcon)
    • Bioinformatics Analysis Tool (NovoMagic)
    • Customer Service System (CSS)
    • Brochures
    • Case Studies
    • Webinar
    • Blog
    • Sample Guidelines
    • Cancer Research
    • Immuno-oncology
    • Agrigenomics
    • Environment
    • Food Science
    • Human Microbiome
    • Plant and Animal Microbiome
    • Drug Discovery and Development
    • Rare and Complex Diseases
    • About Us
    • Our Locations
    • News
    • Careers
  • Contact UsContact Us

ServicesServices menu

SupportSupport menu

CompanyCompany menu

Services
Whole Genome SequencingDe novo SequencingAmplicon SequencingShotgun Metagenomic SequencingDirected DNA Methylation Sequencing (DM-Seq)mRNA SequencingSingle Cell Gene ExpressionVisium HD Spatial Gene ExpressionXenium In Situ Spatial TranscriptomeOlink ProteomicsUntargeted Metabolomics
Support
NovoMagic Bioinformatics Analysis ToolCustomer Service SystemFalcon Intelligent Delivery Platform
Company
About UsOur LocationsOur PlatformsNewsCareersContact Us
LinkedInLinkedIn hoverYouTubeYouTube hoverXX hover
Copyright © 2026 Novogene Inc. All rights reserved.For Research Use Only. Not for Clinical Diagnostic Use.
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Metagenome Sequencing

Comprehensive metagenomics solutions for profiling microbial communities, discovering novel organisms, and uncovering functional insights.
Request a Quote
(Metagenome Sequencing)
Request a Quote
(Metagenome Sequencing)

Whether you're investigating the human microbiome, environmental ecosystems, agriculture, or infectious diseases, our metagenomics services provide reliable sequencing data and comprehensive bioinformatics to help answer complex microbial research questions.

What are you studying?

Select the metagenomics workflow that best matches your research objectives.

16S/18S/ITS Amplicon Sequencing

Cost-effective microbial diversity profiling.

Bacterial communities
Fungal communities
Microbial ecology
Diversity analysis
View Service
(16S/18S/ITS Amplicon Sequencing)
16S/18S/ITS Amplicon Sequencing

Cost-effective microbial diversity profiling.

Bacterial communities
Fungal communities
Microbial ecology
Diversity analysis
View Service
(16S/18S/ITS Amplicon Sequencing)
Shotgun Metagenomic Sequencing

Comprehensive microbial community profiling and functional analysis.

Taxonomic profiling
Functional annotation
Antimicrobial resistance
Novel gene discovery
View Service
(Shotgun Metagenomic Sequencing)
Shotgun Metagenomic Sequencing

Comprehensive microbial community profiling and functional analysis.

Taxonomic profiling
Functional annotation
Antimicrobial resistance
Novel gene discovery
View Service
(Shotgun Metagenomic Sequencing)

What are you studying?

Select the metagenomics workflow that best matches your research objectives.

16S/18S/ITS Amplicon Sequencing

Cost-effective microbial diversity profiling.

Bacterial communities
Fungal communities
Microbial ecology
Diversity analysis
View Service
(16S/18S/ITS Amplicon Sequencing)
16S/18S/ITS Amplicon Sequencing

Cost-effective microbial diversity profiling.

Bacterial communities
Fungal communities
Microbial ecology
Diversity analysis
View Service
(16S/18S/ITS Amplicon Sequencing)
Shotgun Metagenomic Sequencing

Comprehensive microbial community profiling and functional analysis.

Taxonomic profiling
Functional annotation
Antimicrobial resistance
Novel gene discovery
View Service
(Shotgun Metagenomic Sequencing)
Shotgun Metagenomic Sequencing

Comprehensive microbial community profiling and functional analysis.

Taxonomic profiling
Functional annotation
Antimicrobial resistance
Novel gene discovery
View Service
(Shotgun Metagenomic Sequencing)

Why Choose Novogene for Your Metagenomics Project?

Proven scale and expertise

Over 600k samples delivered annually across amplicon and shotgun metagenomic sequencing, with expertly designed workflows for complex samples and challenging research questions.

Proven scale and expertise

Over 600k samples delivered annually across amplicon and shotgun metagenomic sequencing, with expertly designed workflows for complex samples and challenging research questions.

Validated quality, fast delivery

Industry-leading sequencing quality backed by Zymo-validated standards and strict contamination controls, with data delivered in as little as two weeks after sample submission.

Validated quality, fast delivery

Industry-leading sequencing quality backed by Zymo-validated standards and strict contamination controls, with data delivered in as little as two weeks after sample submission.

Local support, global standards

Regional technical teams provide personalized assistance at every step, paired with secure, user-friendly data analysis through our NovoMagic cloud platform.

Local support, global standards

Regional technical teams provide personalized assistance at every step, paired with secure, user-friendly data analysis through our NovoMagic cloud platform.

Why Choose Novogene for Your Metagenomics Project?

Proven scale and expertise

Over 600k samples delivered annually across amplicon and shotgun metagenomic sequencing, with expertly designed workflows for complex samples and challenging research questions.

Proven scale and expertise

Over 600k samples delivered annually across amplicon and shotgun metagenomic sequencing, with expertly designed workflows for complex samples and challenging research questions.

Validated quality, fast delivery

Industry-leading sequencing quality backed by Zymo-validated standards and strict contamination controls, with data delivered in as little as two weeks after sample submission.

Validated quality, fast delivery

Industry-leading sequencing quality backed by Zymo-validated standards and strict contamination controls, with data delivered in as little as two weeks after sample submission.

Local support, global standards

Regional technical teams provide personalized assistance at every step, paired with secure, user-friendly data analysis through our NovoMagic cloud platform.

Local support, global standards

Regional technical teams provide personalized assistance at every step, paired with secure, user-friendly data analysis through our NovoMagic cloud platform.

Available Sequencing Platforms

The right sequencing platform depends on your research objectives, target variants, and coverage requirements. Explore the our services to determine the best fit for your project. Contact us for a project discussion.

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NovaSeq X Plus
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Nanopore PromethION & P2i
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1/1
PacBio Revio

Available Sequencing Platforms

The right sequencing platform depends on your research objectives, target variants, and coverage requirements. Explore the our services to determine the best fit for your project. Contact us for a project discussion.

Image
Image
1/1
NovaSeq X Plus
Image
Image
1/1
Nanopore PromethION & P2i
Image
Image
1/1
PacBio Revio
Image
Image
1/1
NovaSeq X Plus
Image
Image
1/1
Nanopore PromethION & P2i
Image
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1/1
PacBio Revio

Project Workflow

Project Workflow

Background
Background

Ready to Start Your Project?

Discuss your research with our specialist to find the right sequencing solution.

 
 
 
 
 
 
 
 
 
 
Privacy PolicyCookie PolicyCareers
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banner mobile bg

Metagenome Sequencing

Comprehensive metagenomics solutions for profiling microbial communities, discovering novel organisms, and uncovering functional insights.
Request a Quote
(Metagenome Sequencing)
Request a Quote
(Metagenome Sequencing)

Whether you're investigating the human microbiome, environmental ecosystems, agriculture, or infectious diseases, our metagenomics services provide reliable sequencing data and comprehensive bioinformatics to help answer complex microbial research questions.

What are you studying?

Select the metagenomics workflow that best matches your research objectives.

16S/18S/ITS Amplicon Sequencing

Cost-effective microbial diversity profiling.

Bacterial communities
Fungal communities
Microbial ecology
Diversity analysis
View Service
(16S/18S/ITS Amplicon Sequencing)
16S/18S/ITS Amplicon Sequencing

Cost-effective microbial diversity profiling.

Bacterial communities
Fungal communities
Microbial ecology
Diversity analysis
View Service
(16S/18S/ITS Amplicon Sequencing)
Shotgun Metagenomic Sequencing

Comprehensive microbial community profiling and functional analysis.

Taxonomic profiling
Functional annotation
Antimicrobial resistance
Novel gene discovery
View Service
(Shotgun Metagenomic Sequencing)
Shotgun Metagenomic Sequencing

Comprehensive microbial community profiling and functional analysis.

Taxonomic profiling
Functional annotation
Antimicrobial resistance
Novel gene discovery
View Service
(Shotgun Metagenomic Sequencing)

What are you studying?

Select the metagenomics workflow that best matches your research objectives.

16S/18S/ITS Amplicon Sequencing

Cost-effective microbial diversity profiling.

Bacterial communities
Fungal communities
Microbial ecology
Diversity analysis
View Service
(16S/18S/ITS Amplicon Sequencing)
16S/18S/ITS Amplicon Sequencing

Cost-effective microbial diversity profiling.

Bacterial communities
Fungal communities
Microbial ecology
Diversity analysis
View Service
(16S/18S/ITS Amplicon Sequencing)
Shotgun Metagenomic Sequencing

Comprehensive microbial community profiling and functional analysis.

Taxonomic profiling
Functional annotation
Antimicrobial resistance
Novel gene discovery
View Service
(Shotgun Metagenomic Sequencing)
Shotgun Metagenomic Sequencing

Comprehensive microbial community profiling and functional analysis.

Taxonomic profiling
Functional annotation
Antimicrobial resistance
Novel gene discovery
View Service
(Shotgun Metagenomic Sequencing)

Why Choose Novogene for Your Metagenomics Project?

Proven scale and expertise

Over 600k samples delivered annually across amplicon and shotgun metagenomic sequencing, with expertly designed workflows for complex samples and challenging research questions.

Proven scale and expertise

Over 600k samples delivered annually across amplicon and shotgun metagenomic sequencing, with expertly designed workflows for complex samples and challenging research questions.

Validated quality, fast delivery

Industry-leading sequencing quality backed by Zymo-validated standards and strict contamination controls, with data delivered in as little as two weeks after sample submission.

Validated quality, fast delivery

Industry-leading sequencing quality backed by Zymo-validated standards and strict contamination controls, with data delivered in as little as two weeks after sample submission.

Local support, global standards

Regional technical teams provide personalized assistance at every step, paired with secure, user-friendly data analysis through our NovoMagic cloud platform.

Local support, global standards

Regional technical teams provide personalized assistance at every step, paired with secure, user-friendly data analysis through our NovoMagic cloud platform.

Why Choose Novogene for Your Metagenomics Project?

Proven scale and expertise

Over 600k samples delivered annually across amplicon and shotgun metagenomic sequencing, with expertly designed workflows for complex samples and challenging research questions.

Proven scale and expertise

Over 600k samples delivered annually across amplicon and shotgun metagenomic sequencing, with expertly designed workflows for complex samples and challenging research questions.

Validated quality, fast delivery

Industry-leading sequencing quality backed by Zymo-validated standards and strict contamination controls, with data delivered in as little as two weeks after sample submission.

Validated quality, fast delivery

Industry-leading sequencing quality backed by Zymo-validated standards and strict contamination controls, with data delivered in as little as two weeks after sample submission.

Local support, global standards

Regional technical teams provide personalized assistance at every step, paired with secure, user-friendly data analysis through our NovoMagic cloud platform.

Local support, global standards

Regional technical teams provide personalized assistance at every step, paired with secure, user-friendly data analysis through our NovoMagic cloud platform.

Available Sequencing Platforms

The right sequencing platform depends on your research objectives, target variants, and coverage requirements. Explore the our services to determine the best fit for your project. Contact us for a project discussion.

Image
Image
1/1
NovaSeq X Plus
Image
Image
1/1
Nanopore PromethION & P2i
Image
Image
1/1
PacBio Revio

Available Sequencing Platforms

The right sequencing platform depends on your research objectives, target variants, and coverage requirements. Explore the our services to determine the best fit for your project. Contact us for a project discussion.

Image
Image
1/1
NovaSeq X Plus
Image
Image
1/1
Nanopore PromethION & P2i
Image
Image
1/1
PacBio Revio
Image
Image
1/1
NovaSeq X Plus
Image
Image
1/1
Nanopore PromethION & P2i
Image
Image
1/1
PacBio Revio

Project Workflow

Project Workflow

Background
Background

Ready to Start Your Project?

Discuss your research with our specialist to find the right sequencing solution.

 
 
 
 
 
 
 
 
 
 
Privacy PolicyCookie PolicyCareers